Interactive and Innovative Molecular Graphics
Ambience Visualization Techniques
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QuteMol is an open source (GPL), interactive, high quality molecular visualization system. QuteMol exploits the current GPU capabilites through OpenGL shaders to offers an array of innovative visual effects. QuteMol visualization techniques are aimed at improving clarity and an easier understanding of the 3D shape and structure of large molecules or complex proteins.
- Real Time Ambient Occlusion
- Depth Aware Silhouette Enhancement
- Ball and Sticks, Space-Fill and Liquorice visualization modes
- High resolution antialiased snapshots for creating publication quality renderings
- Automatic generation of animated gifs of rotating molecules for web pages animations
- Real-time rendering of large molecules and protein (>100k atoms)
- Standard PDB input
- Quick installers for Win and Mac OS X (intel) (new!)
- Support as a plugins of the NanoEngineer-1 the modeling and simulation program for nano-composites (new!)
QuteMol was developed by Marco Tarini and Paolo Cignoni of the Visual Computing Lab at ISTI - CNR
Links |
DownloadQuteMol! v 0.4.1 - 6 Jun 2007(whatsnew.txt) |
| QuteMol project page and forums on 169766&type=1' width=88 align=top border=0> |
| See a few screenshots of the visual effects featured in QuteMol. |
| See a few side to side comparisons between typical (state-of-the-art) molecular space-fill real-time renderings and QuteMol ambient occlusion enhanced renderings. |
| Remember that QuteMol is citeware: if you use images obtained with it then you should always cite QuteMol, especially in websites, scientific papers, books, manuals, etc. How to cite. |
| This paper, presented at IEEE 2006 Visualization conference, describes a few of the QuteMol tricks. Abstract:The paper presents a set of combined techniques to enhance the real-time visualization of simple or complex molecules (up to order of 10^6 of atoms) in space fill mode.[more]The proposed approach includes an innovative technique for efficient computation and storage of an ambient occlusion terms, a small set of GPU accelerated procedural impostors for space-fill and ball-and-stick rendering, and novel edge-cueing techniques. As a result, the user's understanding of the three-dimensional structure under inspection is strongly increased (even for still images), while the rendering still occurs in real time.[hide][hide] |
| A quick troubleshooting guide covering the most common problems reported by QuteMol users. |
| The slides that have been used to present the CG techinques used by QuteMol at the IEEE 2006 Visualization conference - 3 Nov 2006. You can also see the quick (80 secs) preview slides. |
BERNING
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Mr. Berning is an entrepreneur with over 20 years of experience managing technology start-ups. Mr. Berning was the CEO of Hardcore Computer/Liquid Cool Solutions from 2007 to 2012. Prior to Liquid Cool Solutions Mr. Berning was CEO and Chairman of the Board of PEMSTAR from its founding in 1994. Mr. Berning led PEMSTAR to an IPO on NASDAQ in 2000 and its merger with Benchmark Electronics. In the early part of his career, Mr. Berning held numerous positions in management and engineering at IBM. He has sat on numerous boards including the Greater Rochester Area University Center, United Way of Olmsted County and the Advisory and Advocacy Board of the University of Minnesota Rochester. Mr. Berning received his M.B.A. and B.S. in industrial engineering from St. Cloud University.
